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UgandaEMR is the custom implementation of OpenMRS in Uganda which is mandated by the Ministry of Health. As of 2016 it includes HIV testing and treatment for adults and children and SMC, along with mandated ministry reports for facility management. Planned short-term features include Tuberculosis and MCH modules.

UgandaEMR is a starting point if the clinic/hospital wants to follow Ministry guidelines or will receive funding from the government in any way. Private clinics can use it if it meets their specific needs.